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Universidad EAFIT
Carrera 49 # 7 sur -50 Medellín Antioquia Colombia
Carrera 12 # 96-23, oficina 304 Bogotá Cundinamarca Colombia
(57)(4) 2619500 contacto@eafit.edu.co
EAFITCentrosApoloTechnical Specifications

Technical Specifications

Apolo ​II​

​​​​​​​​Hardware Specific​​​​​​​ations ​​​

Servers:

  • Master Node: 1 Server DELL PowerEdge R730: Intel Xeon E5-2683v4@2.10GHz (32 Cores) 32 GB RAM DDR4@2400 MHz. HDD: 480 GB SAS-3@12 Gbps. High Speed Network Adapter​​​​​​: ConnectX-3 Dual Port. 

  • Coprocessing: 1 Server Dell PowerEdge R730: Intel Xeon E5-2683v4@2.10GHz (32 Cores) 64 GB RAM DDR4@2400 MHz. Coprocessor: nVidia Tesla K80 GPU: 2x Kepler GK210 Memory size (GDDR5) : 24GB (12GB per GPU). CUDA cores: 4992 (2496 per GPU). HDD: 1 TB SAS-3@12 Gbps. High Speed Network Adapter: ConnectX-3 Dual Port.
  • Processing: 5 Servers DELL PowerEdge M630: Intel Xeon E5-2683v4@2.10GHz (32 Cores) 64 GB RAM DDR4@2400 MHz. HDD: 1 TB SATA III@12 Gbps. High Speed Network Adapter: ConnectX-3 Dual Port.
  • Big Memory: 1 Server HPE DL360 G9: Intel Xeon E5-2670@2.30Ghz (24 Cores) 388 GB RAM DDR4@​​​2133 MHz. HDD: 1 TB SATA III. High Speed Network Adapter: Connect-IB MT27600 Q​SFP@56 Gbps Dual Port.
  • Chassis: 1 DELL m1000e
  • Rack Units: 18

Netw​​orks:

  • Data Network: Infiniband Mellanox FDR 56 Gbps
  • Communications Network: Infiniband Mellanox FDR 56 Gbps
  • Management Network: Ethernet 1 Gbps

Storag​​​e:

  • NAS: Dell MD3820F 32 TB
  • SSD: Samsung NVME SSD 6 TB​

Software Specifi​​​​​​cati​​ons

Cluster Software:
  • Operating System: Linux Rocks 6.2 - 64 bits
  • Resource Management System: Slurm 16.05
  • Compilers: Intel Parallel Studio XE 2017

Installed Soft​ware (alphabetically sorted):

​​​

​Abinit

Gurobi​

Octave​

​Atlas

​HDF5

​OpenFoam

​Biopython

​Hmmer

​OpenMPI

​ClustalW

​IOzone

​Paraview

​Cmake

​Iperf

​Phylip

​Code Saturne

​Jasper

​prottest

​DIRAC

​Java

​Python

​Emboss

​Lammps

​Quantum ESPRessO

​FAST

​Lapack

​R

​FFTW2

​LibPng

​Subversion

​Gamess

​Libtool

​Swig

​GCC

​MPIBlast

​TCoffee

​gfortran

​Mpich2

​TIGR Assembler

​Git

​MrBayes

​Torque

​Glib2

​Muscle

Glimmer​

​NCBI Blas

​​